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Certification track: Professional Cloud DevOps Engineer (PDE)

Windmill on GKE Autopilot

Windmill on GKE Autopilot

Windmill is an open-source developer platform for building internal tools, scripts, flows, and automations. This module deploys Windmill on GKE Autopilot on top of the App_GKE foundation, which provisions and manages the shared Google Cloud and Kubernetes infrastructure.

This guide focuses on the cloud services Windmill uses and how to explore and operate them from the Google Cloud Console and the command line. For the mechanics common to every GKE application — Workload Identity, ingress, autoscaling, CI/CD, Cloud Armor, IAP, Binary Authorization, VPC Service Controls, backups, and the deployment lifecycle — refer to the App_GKE foundation guide rather than repeating them here.


1. Overview

Windmill runs as a combined server+worker workload. The deployment wires together a focused set of Google Cloud services:

CapabilityGoogle Cloud serviceNotes
ComputeGKE AutopilotCombined server+worker pods, 2 vCPU / 2 GiB by default, horizontally autoscaled
DatabaseCloud SQL for PostgreSQL 16Required — Windmill requires PostgreSQL 16 or later
Object storageCloud StorageA windmill-data bucket for workflow outputs and artefacts
SecretsSecret ManagerAuto-generated database password and SMTP placeholder secret
IngressCloud Load BalancingExternal LoadBalancer, optional custom domain + managed certificate

Sensible defaults worth knowing up front:

  • PostgreSQL 16 is required. Windmill uses PostgreSQL-specific features; the database engine is fixed. Selecting an older version or NONE will cause the init job to fail.
  • Combined server+worker mode. MODE=server,worker and NUM_WORKERS=3 run the API server and script execution workers in the same pod. For independent worker scaling, define additional Kubernetes Deployments via additional_services.
  • DISABLE_NSJAIL=true is injected automatically. GKE Autopilot does not grant CAP_SYS_ADMIN or user namespaces; Windmill's Linux namespace isolation is disabled accordingly.
  • Redis is disabled by default. Windmill operates without Redis for single-replica deployments. Enable Redis for distributed queue behaviour with multiple replicas.
  • session_affinity is None. Windmill's API is stateless and uses cookie-based authentication, so sticky routing is not required.
  • Health probes target /api/version. This lightweight endpoint returns the Windmill version string when the service is ready — no startup migration delay is required.
  • An SMTP placeholder secret is provisioned automatically. Replace the {prefix}-smtp-password value in Secret Manager before enabling email notifications.

2. Google Cloud Services & How to Explore Them

All commands assume you have run gcloud container clusters get-credentials <cluster> --region <region> --project <project> and that PROJECT, REGION, and NAMESPACE are set. The namespace and other identifiers are reported in the deployment Outputs.

A. GKE Autopilot — the Windmill workload

Windmill pods are scheduled on Autopilot, which bills for the CPU/memory the pods actually request. Horizontal Pod Autoscaling sizes the deployment between the minimum and maximum replica counts. The default workload type is Deployment; set stateful_pvc_enabled = true to auto-select StatefulSet with per-pod persistent volumes.

  • Console: Kubernetes Engine → Workloads → select the Windmill workload to see pods, revisions, and events. Kubernetes Engine → Services & Ingress shows the external IP.
  • CLI:
    kubectl get pods,svc,hpa -n "$NAMESPACE"
    kubectl logs -n "$NAMESPACE" deploy/<service-name> --tail=100
    kubectl describe hpa -n "$NAMESPACE" # current vs target utilisation

See App_GKE for how Autopilot, scaling, and the workload type (Deployment vs StatefulSet) are managed.

B. Cloud SQL for PostgreSQL 16

Windmill stores all application data — scripts, flows, variables, resources, schedules, and job history — in a managed Cloud SQL for PostgreSQL 16 instance. Pods reach it privately through the Cloud SQL Auth Proxy sidecar over a Unix socket; no public IP is exposed. On first deploy an initialization Job idempotently creates the application database and user.

  • Console: SQL → select the instance for connections, backups, flags, and metrics.
  • CLI:
    gcloud sql instances list --project "$PROJECT"
    gcloud sql instances describe <instance-name> --project "$PROJECT"
    # Open an interactive shell to inspect schema/data:
    gcloud sql connect <instance-name> --user=<db-user> --project "$PROJECT"

The instance name, database name, user, and the Secret Manager secret holding the password are all surfaced in the Outputs. For the connection model, automated backups, and password rotation, see App_GKE.

C. Cloud Storage

A dedicated Cloud Storage bucket (windmill-data) is provisioned for workflow outputs, artefacts, and script dependencies. The workload service account is granted access automatically.

  • Console: Cloud Storage → Buckets.
  • CLI:
    gcloud storage buckets list --project "$PROJECT"
    gcloud storage ls gs://<data-bucket>/ # bucket name is in the Outputs

See App_GKE for additional bucket options, GCS Fuse mounts, and CMEK.

D. Secret Manager

The database password and the SMTP placeholder password are stored as Secret Manager secrets and injected into pods at runtime; plaintext never appears in configuration.

  • Console: Security → Secret Manager.
  • CLI:
    gcloud secrets list --project "$PROJECT"
    gcloud secrets versions access latest --secret=<secret-name> --project "$PROJECT"
    # Replace the SMTP placeholder before enabling email features:
    echo -n "your-smtp-password" | gcloud secrets versions add \
    <smtp-secret-name> --data-file=- --project "$PROJECT"

The database password secret name is in the Outputs. See App_GKE for the Secret Store CSI integration and rotation.

E. Networking & ingress

By default the workload is exposed through an external Cloud Load Balancing IP. A custom domain with a Google-managed certificate can be enabled, and a static IP can be reserved so the address survives redeploys.

  • Console: Network services → Load balancing; VPC network → IP addresses.
  • CLI:
    kubectl get ingress,svc -n "$NAMESPACE"
    gcloud compute addresses list --project "$PROJECT"

See App_GKE for custom domains, Cloud CDN, and static IP details.

F. Cloud Logging & Monitoring

Pod stdout/stderr flow to Cloud Logging in structured JSON format (JSON_FMT=true). GKE and Cloud SQL metrics flow to Cloud Monitoring. A Prometheus metrics endpoint is exposed at :9001 for scraping within the VPC.

  • Console: Logging → Logs Explorer; Monitoring → Dashboards / Alerting.
  • CLI:
    gcloud logging read 'resource.type="k8s_container" AND resource.labels.namespace_name="'"$NAMESPACE"'"' \
    --project "$PROJECT" --limit 50

3. Windmill Application Behaviour

  • First-deploy database setup. An initialization Job (db-init) runs on first deploy using postgres:16-alpine. It idempotently creates the windmill_admin and windmill_user roles, the application user, and the application database, then grants full privileges. The job is safe to re-run.
  • Automatic schema migrations. Windmill runs its own database migrations on startup, so upgrading the application_version applies schema changes automatically.
  • Combined server+worker mode. Each pod runs both the Windmill API/scheduler and NUM_WORKERS=3 script execution workers. Workers execute Python, TypeScript, Bash, Go, and SQL scripts in isolated subprocesses. The WORKER_GROUP=default assignment means all flows and scripts route to these pods by default.
  • BASE_URL and BASE_INTERNAL_URL. The entrypoint.sh shim constructs DATABASE_URL from platform-injected DB_* variables at start time. When GKE_SERVICE_URL is set (injected by App_GKE once the LoadBalancer IP is allocated), BASE_URL is updated automatically so OAuth callbacks and webhook URLs resolve correctly.
  • Prometheus metrics. METRICS_ADDR=:9001 exposes Windmill metrics at http://<pod-ip>:9001/metrics for scraping from within the cluster.
  • Health path. Both startup and liveness probes use GET /api/version. This endpoint returns HTTP 200 with the version string when Windmill is ready to serve traffic.
  • SMTP email notifications. The WINDMILL_SMTP_PASS secret is initialised with a 16-character placeholder. Replace it and supply WINDMILL_SMTP_HOST, WINDMILL_SMTP_PORT, and WINDMILL_SMTP_FROM via environment_variables to enable email notifications from flows and scripts.
  • Inspect scheduled flows and jobs:
    kubectl get cronjobs -n "$NAMESPACE"
    kubectl get jobs -n "$NAMESPACE" --sort-by=.metadata.creationTimestamp

4. Configuration Variables

Variables are grouped exactly as they appear on the deployment platform. Only settings specific to or notable for Windmill are listed; every other input is inherited from App_GKE with its standard behaviour and defaults.

Group 1 — Project & Identity

VariableDefaultDescription
project_id(required)Target Google Cloud project.
regionus-central1Region for the workload and regional resources.

Group 2 — Deployment Environment

VariableDefaultDescription
tenant_deployment_iddemoShort suffix that makes resource names unique per environment.
support_users[]Emails granted project access and monitoring alerts.
resource_labels{}Labels applied to all resources for cost/ownership tracking.

Group 3 — Application Identity

VariableDefaultDescription
application_namewindmillBase name for resources. Do not change after first deploy.
application_display_nameWindmillFriendly name shown in the Console.
application_description(set)Workload description annotation.
application_versionlatestWindmill image version tag; set to a specific release (e.g. 1.400.0) for production.

Group 4 — Runtime & Scaling

VariableDefaultDescription
deploy_applicationtrueSet false to provision infrastructure only.
container_image_sourcecustomcustom builds with the bundled Dockerfile; prebuilt deploys an existing image URI.
container_image""Override image URI. Leave empty for Cloud Build to manage.
cpu_limit2000mCPU per pod. 2 vCPU is the recommended minimum for combined server+worker mode.
memory_limit2GiMemory per pod. 4 GiB recommended for production Python/TypeScript workloads.
min_instance_count1Minimum replicas. Keep ≥ 1 so webhooks and scheduled flows have a pod to run on.
max_instance_count3Maximum replicas (autoscaler ceiling).
container_port8000Windmill listens on port 8000.
enable_cloudsql_volumetrueCloud SQL Auth Proxy sidecar — required for the Unix socket connection.
enable_image_mirroringtrueMirror the Windmill image into Artifact Registry to avoid ghcr.io rate limits.
enable_vertical_pod_autoscalingfalseLet Autopilot tune resource requests automatically.
termination_grace_period_seconds60Seconds to wait after SIGTERM; increase to let in-flight jobs finish gracefully.

Group 5 — Environment Variables & Secrets

VariableDefaultDescription
environment_variables{}Extra non-secret settings merged with Windmill defaults. Use to set WINDMILL_SMTP_HOST, NUM_WORKERS overrides, etc.
secret_environment_variables{}Map of env var → Secret Manager secret name. WINDMILL_SMTP_PASS is injected automatically.

Group 6 — GKE Backend & Cluster

VariableDefaultDescription
service_typeLoadBalancerHow the Service is exposed.
session_affinityNoneWindmill's API is stateless; sticky routing is not required.
workload_typenullAuto-resolves to StatefulSet when stateful_pvc_enabled = true.
network_tags['nfsserver']Node/pod tags for firewall rules.
gke_cluster_name""GKE cluster to use. Leave empty for auto-discovery.
namespace_name""Kubernetes namespace. Leave empty to auto-generate.

Group 7 — StatefulSet

VariableDefaultDescription
stateful_pvc_enablednullEnable PVC templates in a StatefulSet. Setting true auto-selects StatefulSet.
stateful_pvc_size10GiStorage size per PVC.
stateful_pvc_mount_path/dataContainer path where the PVC is mounted.
stateful_pvc_storage_classstandard-rwoKubernetes StorageClass for PVCs.

Group 9 — Reliability Policies

VariableDefaultDescription
enable_pod_disruption_budgetfalseProtect availability during node upgrades.
pdb_min_available1Minimum pods available during disruptions.

Group 10 — Observability & Health

VariableDefaultDescription
startup_probe_config/api/version, 10s period, 10 failuresHTTP probe against Windmill's version endpoint.
health_check_config/api/version, 30s period, 3 failuresLiveness probe.
uptime_check_configdisabledOptional Cloud Monitoring uptime check.
alert_policies[]Optional metric alert policies.

Group 11 — Jobs & Scheduled Tasks

VariableDefaultDescription
initialization_jobs[]Leave empty to use the built-in db-init PostgreSQL job.
cron_jobs[]Recurring Kubernetes CronJobs for maintenance or integration tasks.
additional_services[]Sidecar or helper Deployments alongside Windmill (e.g. dedicated worker pools).

Group 12 — CI/CD & GitHub Integration

Standard App_GKE Cloud Build / Cloud Deploy integration — see App_GKE. Key inputs: enable_cicd_trigger, github_repository_url, github_token, enable_cloud_deploy, enable_binary_authorization.

Group 13 — Filesystem (NFS)

VariableDefaultDescription
enable_nfsfalseNFS is disabled by default — Windmill does not require shared file storage.
nfs_mount_path/mnt/nfsMount path inside the container when NFS is enabled.

Group 14 — Cloud Storage & Artifact Registry

VariableDefaultDescription
create_cloud_storagetrueProvision the windmill-data bucket and any additional buckets.
storage_buckets[]Additional GCS buckets beyond the auto-provisioned data bucket.
gcs_volumes[]GCS Fuse mounts via the CSI driver.
manage_storage_kms_iam / enable_artifact_registry_cmekfalseCMEK options.

Group 16 — Database Backend

VariableDefaultDescription
database_typePOSTGRES_16Fixed — Windmill requires PostgreSQL 16. Do not change.
db_namewindmillDatabase name. Immutable after first deploy.
db_userwindmillApplication user. Immutable after first deploy.
database_password_length32Generated password length (16–64).
enable_auto_password_rotationfalseZero-downtime DB password rotation.
rotation_propagation_delay_sec90Seconds to wait after rotation before restarting pods.

Group 17 — Backup & Maintenance

VariableDefaultDescription
backup_schedule0 2 * * *Automated backup cron (UTC).
backup_retention_days7Retention; raise to 30–90 for production/compliance.
enable_backup_import / backup_source / backup_uri / backup_formatrestore optionsRestore from a backup on deploy.

Group 18 — Custom SQL Scripts

enable_custom_sql_scripts, custom_sql_scripts_bucket, custom_sql_scripts_path, custom_sql_scripts_use_root — run SQL from a GCS bucket after provisioning. See App_GKE.

Group 19 — Custom Domain, Static IP & Networking

VariableDefaultDescription
enable_custom_domaintrueProvision Ingress for custom hostnames + managed certificate.
application_domains[]Hostnames to serve.
reserve_static_iptrueStable external IP across redeploys.
network_tags['nfsserver']GKE node/pod tags for firewall rules.

Group 20 — Identity-Aware Proxy (IAP)

VariableDefaultDescription
enable_iapfalseRequire Google sign-in in front of Windmill.
iap_authorized_users / iap_authorized_groups[]Who may access.
iap_oauth_client_id / iap_oauth_client_secret""Required when IAP is enabled (sensitive).

Group 21 — Cloud Armor & Redis

VariableDefaultDescription
enable_cloud_armorfalseAttach a Cloud Armor (WAF) policy to the Ingress backend.
admin_ip_ranges[]CIDRs allowed privileged access.
enable_redisfalseEnable Redis for distributed queue behaviour (optional).
redis_host""Redis endpoint. Leave blank and enable NFS for auto-discovery.
redis_port6379Redis port.
redis_auth""Optional Redis auth password (sensitive).

Group 22 — VPC Service Controls & Audit Logging

VariableDefaultDescription
enable_vpc_scfalseEnforce a VPC-SC perimeter (requires organization_id).
vpc_cidr_ranges / vpc_sc_dry_run(set)Access level CIDRs / dry-run mode.
enable_audit_loggingfalseDetailed Cloud Audit Logs.

5. Outputs

These values are returned on a successful deployment and are the quickest way to locate and explore the running resources.

OutputDescription
service_nameKubernetes Service name.
namespaceNamespace the workload runs in.
service_cluster_ipIn-cluster ClusterIP.
stage_service_cluster_ipsMap of ClusterIPs for stage-specific services (Cloud Deploy).
service_external_ipExternal LoadBalancer IP (when a static IP is reserved).
service_urlURL to reach Windmill.
database_instance_nameCloud SQL instance name.
database_nameApplication database name.
database_userApplication database user.
database_password_secretSecret Manager secret holding the DB password.
database_host / database_portDB endpoint (127.0.0.1 via the Auth Proxy) / port.
storage_bucketsCreated Cloud Storage buckets.
network_name / network_exists / regionsVPC network, presence, available regions.
container_image / container_registryDeployed image and Artifact Registry repo.
monitoring_enabled / monitoring_notification_channelsMonitoring status and channels.
initialization_jobs / db_import_jobNames of the setup and (optional) import jobs.
deployment_id / tenant_id / resource_prefixNaming identifiers.
project_id / project_numberProject identifiers.
cicd_enabled / github_repository_url / github_repository_owner / github_repository_name / cicd_configurationCI/CD status and details.
artifact_registry_repository / cloudbuild_trigger_name / cloudbuild_trigger_idRegistry and build trigger.
kubernetes_readyWhether the cluster/workload is ready. false on the first apply of a new inline cluster; re-run apply to complete.
vpc_sc_enabled / vpc_sc_perimeter_name / vpc_sc_dry_run_modeVPC-SC status.
audit_logging_enabled / artifact_registry_cmek_enabledAudit logging and CMEK status.

6. Configuration Pitfalls & Sensible Defaults

Risk: Critical (data loss / outage / security) — High (service degraded) — Medium (cost or partial degradation) — Low (minor).

SettingSensible valueRiskConsequence if wrong
database_typePOSTGRES_16CriticalWindmill requires PostgreSQL 16; using an older version causes the init job to fail and the database to remain uninitialised.
db_name / db_userset onceCriticalImmutable after first deploy; renaming recreates the DB/user and destroys all scripts, flows, and job history.
enable_cloudsql_volumetrueCriticalWindmill connects via the Auth Proxy Unix socket; disabling this causes immediate database failure and CrashLoopBackOff.
enable_backup_importfalse unless restoringCriticalEnabling without a valid backup_uri fails the import job.
quota_memory_requests / _limitsbinary unitsCriticalBare integers are bytes and block all scheduling.
cpu_limit2000mHighCombined mode runs 3 workers in-process; insufficient CPU throttles all script execution. Each worker needs ~500m.
memory_limit2GiHighWindmill workers execute arbitrary user scripts; OOM kills mid-execution produce silent failures in the UI.
min_instance_count1High0 allows scale-to-zero; scheduled flows will be missed and webhooks return 503 until a pod is ready.
service_url / BASE_URLload balancer IP or custom domainHighEmpty or incorrect value breaks OAuth callbacks, webhook endpoints, and Windmill UI deep-links.
enable_redisfalse for single replica, true for multiMediumWithout Redis, each pod processes only its own local queue; with multiple replicas this causes unpredictable job routing.
pdb_min_available vs min_instance_countleave headroomMedium1/1 can stall node upgrades (single pod cannot be evicted).
backup_schedule0 2 * * *MediumEmpty string disables backups; Windmill stores all automation definitions in PostgreSQL.
enable_iap / enable_cloud_armorenable for productionMediumWithout these, the Windmill UI and API are publicly reachable.
WINDMILL_SMTP_* (via env vars)all fields set togetherMediumPartial SMTP configuration causes silent email delivery failures with no runtime error.
enable_auto_password_rotationfalseMediumWhen enabled, pods must be restarted after rotation; otherwise they use an expired password until connections fail.
enable_vpc_scfalse unless neededHighRequires explicit organization_id; without it VPC-SC is silently skipped, giving a false sense of perimeter security.

For the foundation behaviour referenced throughout — IAM and Workload Identity, autoscaling, ingress and certificates, CI/CD, Cloud Armor, IAP, Binary Authorization, VPC-SC, backups, and image mirroring — see App_GKE. Windmill-specific application configuration shared with the Cloud Run variant is described in Windmill_Common.